I want to look at all my alanines in my protein chain and want a selection in VMD just for this. I don't know what their resID numbers are but want to be able to select them all by the fact they are all alanines.
Type resname ALA
I am starting to write my thesis for Graduate School and I am struggling to find appropriate instrument regarding student perception instrument. The perceptions to be discussed are (a) interest...
17 January 2021 9,218 3 View
I'm in the final stages of compiling a history of medicine bibliography. It will be my second reference work to be published by Jenny Stanford Publishing (my first was "The Nanotechnology...
06 December 2020 3,825 3 View
I hear this type of claim bandied about in certain education circles--namely, by k-12 practitioners themselves--that students' behavior, respectfulness, etc. has all but disappeared. I know that...
15 January 2020 455 2 View
At the foundation of principled nonviolence is the moral obligation of noncooperation with and/or resistance to injustice, oppression, tyranny, etc. I am interested in the various schools of...
28 February 2018 3,393 6 View
I have a question regarding the rel estimate you used. You refer to Raykov's composite scale reliability coeff but from what I could find his coefficient is only applied to two-level data with...
21 April 2013 611 1 View
ICC to measure internal consistency of a scale is estimated using two-way ANOVA as I understand. But ANOVA has assumptions of normality of data & uncorrelated errors. Still, I read that ICC can be...
16 April 2013 4,261 3 View
USA labs short of lab supplies including RNA extraction kits for performing Covid-19 testing. Is there another supply available or an alternative?...
01 January 1970 6,229 2 View
Incompletely cross-linked pdms are difficult to remove.
01 March 2021 798 3 View
Hello I try to install and run the VMD software on windows 10 (64-bit).It doesn`t work and it is closed when I run it. I checked all of tutorials, videos and documents. But they did not work...
22 February 2021 8,211 3 View
Hello all, as I understand there isn't any straight way to get an rdf of atoms from the center of mass or a coordinate of specific atoms in lammps. I wonder if anyone know any trick or way to get...
16 February 2021 2,517 2 View
To maintain the proper crop plan most of the times there is not enough time to make the field ready for the next crop. In this particular context , can bio-decompser be a solution? What about...
16 February 2021 7,068 24 View
14 February 2021 4,194 3 View
I am trying to do some MD simulations of a protein with zinc ions. I am trying to use a charmm forcefield (I have tried 2017 and 2021) and Gromacs. I get an error when doing pdb2gmx Residue 'ZN'...
12 February 2021 9,367 2 View
I am trying to run a molecular dynamics simulation for a ligand that contains a "SEP" residue. also, I am preparing my files using Charmm-GUI using charmm36 ff, but it says that it will rename my...
31 January 2021 6,321 1 View
30 January 2021 4,684 4 View
I am trying to perform homology modeling using the swiss-model but I have found that the swiss-model gives the same number of residues as that of the template. Whereas my sequence has more...
21 January 2021 5,568 3 View
I am looking some resist strippers which can easily remove metal based polymer residue after post dry etch process. I have some candidates below but not sure if they are compatible with doped...
21 January 2021 3,008 3 View