The pre-programmed Annealing/Extension+ plate read step at 60ºC for 1 min is sub-optimal for my qPCR assay (low efficiency, NTC amplification, etc). When I tried to set conditions for my primers (annealing @55ºC, 15 sec; extension@72ºC, 15 sec) that already worked in a LightCycler 480, the error 1404 warn me that the run was aborted due to insufficient time for plate reading. However, it did allow me to reduce time of the pre-programmed step (60ºC, 30 sec). What could I be doing wrong?

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