Motif search in Geneious is not as efficient and intuitive as DNASIS MAX or VectorNTI. Anybody know how make it easier to search for motifs all at once? Did you create a database of motifs to annotate from?
Nikos Gavalas
Hi there.
A site that works for me and it is simple and intuitive is :
http://www.bioinf.manchester.ac.uk/dbbrowser/PRINTS/index.php
Another one that may be of help is:
http://www.genome.jp/tools/motif/
Both of these are pretty simple with the first one from Manchester University being my favorite.
Hope that helps.
Nikos
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Caitlyn Sarmiento
The director of our company wants motif searching to be native to the software program. She doesn't want to use Internet resources.
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Daniel A. Medina
Hi, I recommend you use Bioconductor packages based in R:
http://bioconductor.org/
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