The instrument is GC-MS with autosampler equipped with S B Zebron column (5% Phenyl-Arylene, 95% Dimethylpolysiloxane 30m*0.25mm*0.25micron), that should be very similar to the SPB 5 (5% Phenyl 95% dimethylpolysiloxane).

Target is evaluation of benzene concentration in water before and after adsorption tests: 250 ml of water and benzene (50-200ppm in water) are placed in vial with 750 ml of methanol and toluene (100 ppm in methanol) as internal standard. 1 microliter is injected in the column. Best program evaluated is: split ratio=10, flowrate (He) 1.5 ml/min, 1.8 min at 50C then ramp of 25C/min to 160. You can see the benzene peak well shaped at minute 3 and 1 minute later the toluene peak. 

Ratios benzene/toluene of different consecutive analyses from same sample is sometimes very different (30%). Between each analysis every time an injection with methanol (2 min at 50 then up to 200 C) provides to clean the column.

Excluding leaks and any type of instrument problems, how could be explained this difference? I could also try to increase the split ratio, but I can't believe that this is the cause of a such strong difference.

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