Hi, I am running excitation-emission fluorescence spectra (on algal samples) and I want to use the EEM R package to visualize and analyze the data. However, this package only supports data files coming from the following instruments:
JASCO FP-8500
Hitachi Hi-tech F-7000
Shimadzu RF-6000
Horiba Aqualog
I am using TECAN.
Can anyone send me a data file = .csv, .txt or .xlsx output of a 3D excitation-emission spectrum measurement from any of the above instruments so, that I can adjust my dataset to one of the supported formats? I tried to do it following the EEM manual (https://github.com/chengvt/EEM/blob/master/vignettes/file-io.md#intro) but I can' t make it work. It needs to have certain keywords in certain positions of the file as well as the correct position of the excitation and emission information.
Thanks
Problem solved! "For demonstation purpose, a dataset called “applejuice” is attached with the package. It can be called by data(applejuice). More information about the dataset can be accessed by ?applejuice. " https://cran.r-project.org/web/packages/EEM/vignettes/vignette.html :)
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