when the chromatographic eluted specific protein was eluted with higher salt concentration, after immunization to animals It can elicit immune response, if No whether the higher sodium chloride can not support the immune system of the animals?
DO you know of the size of your protein? Use dialysis tubing with pore sizes smaller than your protein and you'll be fine. Please read the information in the link below: http://www.spectrumlabs.com/dialysis/FAQ.html
Is your protein a multimeric protein? Or, perhaps it is not pure and the contaminants of smaller size dialyze out. Run a SDS-PAGE to verify the purity of your protein after purification. What protein are you purifying?
Despite a prominant single band if there are smaller size bands as well, they may dialyze out- and that is good as you do not want to make ab against contaminating proteins, only the major band. In the presence of multiple proteins as immunogen, a hierarcheal competition can occur. A silver stain can better stain contaminating proteins.
If only they are smaller than your MW cut off dialysis tube they would dialyze out. Refer to th e link http://www.spectrumlabs.com/dialysis/FAQ.html for choosing the right pore size
That depends a lot on the specific protein and its concentration. Surely there are some proteins that would aggregate when the salt concentrations increases. But just very broadly, compared to pH and maybe very low salt, higher salt concentrations are maybe not the most critical for most average proteins. But again it depends a lot on your specific protein. Also depends on how high your salt concentration was.
Any method to assess the conformation of you eluted protein like gelfiltration, native PAGE, CD or antibodies to conformational epitopes would be very good to include. Also you can maybe find some literature or at least indications on the stability of the protein (has it been produced recombinantly? Is that easy? and so on..)