I know how to perform 2 D principal coordinate analysis in GenAlex. I could not figure out about 3D PCoA. My data type is microsatellite. I am trying to use unbiased Nei's genetic distance.
Hi Michael, thank you for the information. Can we use Eigen values for three axis (1 = X, 2 =Y and 3 = z) to have 3 D plot. GenAelx estimates Eigen value for each axis per population. Can we plot them using XSTAT to show 3 dimension PCoA plot?