Does anyone know how to interpret phylogenetic relationships using mirror tree?

01 January 2013 0 9K Report

If anyone has used mirror tree, he/she would surely know that the results give a plot of inter protein distances. The problem I am having is that I do not know how to use the plot or how interpret it; different areas of the plot can be selected, but that highlights all the links on the tree involved in that region so one particular region cannot be ascribed to a particular protein, but rather a relationship between different families. Can anyone provide any assistance?

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