Does anyone know a good online tool (comparable to KOBAS 2.0) for transcriptome analysis?

21 February 2018 1 8K Report

Until now, I was relying on KOBAS ( KEGG Orthology Based Annotation System), which was quite user-friendly and provided p-values for distinct pathways. However, it seems to be no longer available. Does anyone know a comparable online tool for analysis of both microarray and RNA-seq data?

Giuseppe G. F. Leite

Dear Tatyana Pismenyuk,

You can use various tools to make functional pathway enrichment as:

http://amp.pharm.mssm.edu/Enrichr/

https://reactome.org/

https://david.ncifcrf.gov/

Best regards,

Leite

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