Package to combine GO terms to Heatmap of DEGs?

08 September 2017 7,220 0 View

RNA-seq and Differentially expressed genes?

05 June 2017 417 4 View

Samtools and BCFtools for SNP calling?

03 April 2017 1,423 2 View

Trinity, Transcriptome assembly. ./runMe.sh: line 18: ../../Trinity: Permission denied?

I am running Trinity for my transcriptome assembly using the Cluster of our University. I got the the following error: ./runMe.sh: line 18: ../../Trinity: Permission denied. Any one could suggest...

31 December 2016 4,441 3 View

Hi all, Can anyone recommend for me an effective method/protocol for preserving the expression of Plant RNA in situ?

protocol for preserving RNA expression in situ

08 September 2016 5,370 1 View

Can anyone tell me if there is an R package useful for extracting data from the rasters of the bioclimatic variables available in WorldClim database?

R package, Raster, WorldClim database

31 December 2015 1,423 2 View

Does anyone familiar with Cornell condensed format? Convert .txt / . xls files to Cornell condensed file?

Hi,I am trying to use some softwares that require the Cornell condensed format as input! So I need to convert my data from .xls or .txt to Cornell condensed file. There some commercial...

09 October 2015 4,629 1 View

Are there GIS tools for simulating landscape fragmentation that are compatible with QGIS?

I know Patch analyst but it seems compatible only with ArcGis? GIS tools-landscape fragmentation

02 March 2015 1,104 9 View

Does anyone have a protocol for karyotyping or determination of ploidy level of plants by using genomic DNA?

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02 March 2013 904 1 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

MD MOE RMSD

How to calculate the RMSD values for a MD simulation using MOE?

07 August 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

fatal error

When I tried to energy minimization my system, I got fatal error as below. Fatal error: Atomtype opls_116 not found Although I've already added this line: ; include water #include "oplsaa.ff/spc.itp" to [molecultype] directive in my topology.

16 June 2021 0 0 View

What kind of fluid could I use for a pitfall trap that also does not invalidate molecular testing?

Hi, I want to start testing pitfall trap to obtain ants samples, but I need to conduct molecular analysis on those insects. So, what kind of fluid can I use? Ethanol expires too early and I need...

03 March 2021 5,978 5 View

No title

02 March 2021 3,060 3 View

How to repeat an operation on an atom selection for multiple times in PyMol?

Hi, I am trying to construct a multi-layer fibril structure from a single layer in PyMol by translating the layer along the fibril axis. For now, I am able to use the Translate command in PyMol...

02 March 2021 4,569 4 View

New Journal, "Integrative Psychological and Behavioral Science" -- do you not know, and have you not seen, this done before?

Question to you and THEM, the New Journal, "Integrative Psychological and Behavioral Science" -- do you not know, and have you not seen, this done before? There appears to be a core problem for...

02 March 2021 3,024 2 View