Does any have any experience on RNA extraction from Formaldehyde-fixed tissues using QIAGEN (Cat# 73504) ? Most are shown to be degraded after running a gel in my case, any one has any tips ?
Dear Hao Feng, I would recommend you to extract the RNA from fresh tissues since formaldehyde breaks down the RNA from the starting of the fixation process. And the older the FFPE, the lesser RNA quality you get.
Yes, you are absolutely right, to extract RNA from fresh tissues is much better than that in the PFA-fixed ones. But I have to use this approach to collect RNA in my case for downstream assay.