Docking of trinucleotides to proteins?

05 May 2013 1 10K Report

Does anyone know of a docking program (preferably a webserver) that can dock small DNA duplexes or di/trinucleotides to proteins?

Ricardo J Ferreira

Hello.

I think you can perform that kind of docking with anly of the available products (Autodock, VINA, LeadIT, Gold). However, you have to try which program will correlate better with experimental results.

Best regards,

Ricardo Ferreira

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