Hi, what is the best protocol to isolate DNA from FFPE tissue. I have tried KAPA Express Kit, NucliSENS Easymag, Organic Extraction, please advice further. Thank you!
The best way to extract DNA from paraffin blocks is using organic solvents such as xylene, heating and centrifuging, then wash with alcohol several times and finally with water several times, practically carry out the process in reverse, then proceed as indicate commercial kit
You have to remove first the tissue from the paraffin wax using xylene (clearing agent) then ( rehydrate ) place the section in decreasing alcohol concentration 95, 80, 70, 50, 40, 30, 20 and PBS, before extracting the DNA.