Can someone recommend a program for designing allele specific primers?

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Kalpita R Karan

Hi,

U could go through this article and use the link generated by them.

http://www.biomedcentral.com/1471-2164/8/275

Plus, Batch primer three is good too.

http://probes.pw.usda.gov/batchprimer3/overview.html

I hope it helps.

Rajeev Kungur Brahma

Primer3 - online tool

http://biotools.umassmed.edu/bioapps/primer3_www.cgi

PerlPrimer

http://perlprimer.sourceforge.net/

Generunner - Analyze your oligos

http://www.generunner.net/

Gecele Matos Paggi

WebSat - online tool http://wsmartins.net/websat/

Joanna Ciomborowska

PrimerBLAST

http://www.ncbi.nlm.nih.gov/tools/primer-blast/index.cgi?LINK_LOC=BlastHome

Filipe Pereira

SP-DESIGNER http://www2.sophia.inra.fr/urih/sophia_mart/sp_designer/info_sp_designer.php

Grant Morahan

You could try WASP:

http://bioinfo.biotec.or.th/WASP

Lili Vega

Primer Express

Dhafer Al-Koofee

T-ARMS technique

http://rjptonline.org/AbstractView.aspx?PID=2018-11-8-74