Is intron site prediction reliable?
Hello Shreyans,
what is the goal?
usually when you search for a protein-coding exons, the software also gives to you the introns sequences.
you have a lot of good online software to do this. but you also can search for potential splice sites...
give a look to this site:
http://www.molquest.com/molquest.phtml?group=index&topic=gfind
good luck
i was given a long nt seq and asked to find the CDS in it.. It was told that the nt seq contains a gene from arabidopsis thaliana..
Thank you for the suggestion
Preferably non-enzymatic methods as I cant access a luminometer.
04 May 2013 2,701 0 View
Virus eater!
03 April 2012 7,825 4 View
Please correct me if I am wrong- Total RNA extracted from eukaryotic cells has three distinct visible bands on an agarose gel- 28SrRNA, 18SrRNA and the least prominent 5SrRNA & 5.8SrRNA. And...
02 March 2012 2,938 3 View
This a self annealing result of an upper primer from OLIGO EXPLORER 5'-CATCGCACGTCGTCTTTC-3' : : :
01 February 2012 471 16 View
I came across these terms in a post on a topic here: Resistant effect - During Increase of temperature Pelletier effect - During Decrease of temperature Can anyone please explain...
01 February 2012 1,986 0 View
What are the genetic changes that happen in a cell undergoing differentiation? What is our current knowledge in this area?
01 February 2012 7,753 10 View
Hello experts, Does anyone know any free software about retention index prediction ?
08 August 2024 7,403 2 View
I aim to be as skeptical as possible regarding whether a pair of orthologous genes results in the same phenotype in their different but related bacterial organisms under similar environmental...
05 August 2024 6,787 4 View
Molecular docking software/ websites?
02 August 2024 8,704 7 View
I am looking for software to help analyze SELEX NGS data, including alignment, sequence enrichment, and other related tasks. Can anyone recommend suitable tools or software? Best wishes, Waleed
30 July 2024 1,061 5 View
I created a file with my outgroup and ingroup species using Beauti, ran it in BEAST, viewed it in Tracer, and then used TreeAnnotator to create a file that I imported into RASP. Could someone...
28 July 2024 2,979 1 View
PeptiCloud (www.pepticloud.com) is a bioinformatic platform that allows researchers to organize and share their data for their projects as well as collaborate with others in one place. Through...
28 July 2024 4,762 2 View
Hi all. As a beginner in ChIP-seq experiments, I hope you understand that the following questions might be somewhat basic. I am planning to perform ChIP-seq or MeDIP-seq analysis to investigate...
28 July 2024 6,938 1 View
I am reaching out to seek your valuable advice and recommendations regarding the best software tools to use for this research. Specifically, I am looking for software with a user-friendly...
22 July 2024 3,794 1 View
Hey all, I need help testing for multivariate outliers using STATA for my master thesis. The literature recommends the Minimum Covariance Determinant (MCD) (Verardi & Dehon, 2010). I found the...
22 July 2024 8,821 2 View
Dear Researchers, My question is associated with the "MDCI" method in Orca. Please let me clarify my question using a simple example: Suppose we are going to perform CBS extrapolation using "!...
21 July 2024 1,632 0 View