Loreto we were recommended by the Proteomic Service of the “Centro Nacional de Biotecnologia” (Consejo Superior de Investigaciones Cientificas, Madrid) to use ProteoExtract (Subcellular Proteome Extraction Kit) from Calbiochem (Cat# 539790). It is clear that when you collect the “membrane fraction”, it contains cellular membranes and not only plasma membrane. I hope this information is useful for you.