Good reads on phylogenetics.
"Phylogenetic trees made easy" is a great book that comes highly recommend: http://www.sinauer.com/phylogenetic-trees-made-easy-a-how-to-manual.html
regards
The Phylogenetic Handbook: A Practical Approach to Phylogenetic Analysis and Hypothesis Testing (Second Edition)
By Philippe Lemey, Marco Salemi, Anne-Mieke Vandamme
is also a very helpful book
Cheers
Schuh & Brower. Biological Systematics: Principles and Applications
http://www.amazon.com/Biological-Systematics-Principles-Applications-Edition/dp/0801447992
Wheeler. Systematics: A Course of Lectures
http://www.wiley.com/WileyCDA/WileyTitle/productCd-0470671696,subjectCd-LS41.html
Hi, I have frozen two 96-well plates with cells that I need to stain using the CyQuant Cell Proliferation Assay from ThermoFisher (C7026). However, I didn't realize that we only have some very old...
06 January 2021 244 4 View
Hello, I had a question regarding subgroup analysis in small patient numbers. I am currently writing a paper on very rare tumours and the response to therapy in a real-world cohort, so no...
18 March 2020 4,983 16 View
Good afternoon, I am working on my thesis on team work and I need to compare if teams differ when I adopt the rule 'at least 2 members of the team gave valid data' (19 teams in total), against...
14 July 2019 5,957 5 View
I need to use the SLQ for my dissertation studies.
08 August 2018 1,864 3 View
Hello everyone, Since I am interested in the concept of power and theories about it (soc.psy), I would like to find a specific experimental manipulation of it - and so far I am doing terrible! So,...
02 December 2017 6,806 3 View
Hi there, Can anybody recommend an antibody that works well to detect FLAG-tagged protein in mice with flow cytometry? I am considering to use FLAG tag for generating a transgenic mouse. HIS tag...
26 May 2016 3,404 4 View
We heard that the official version of the MELQO is not yet ready to use. But we wondered whether maybe someone has a research version of it or some other experiences to share. We would like to...
27 April 2016 9,234 1 View
Hallo, I am doing some western blot experiments at the moment and have some problems. I transfected a construct in HEK293 cells and loaded a lysate to sds gel and blotted the proteins to...
13 April 2016 3,452 9 View
Me and two of my colleagues from different labs at my institute used three different constructs targeting 3 different genes. All genes seem to get deleted fairly well but unfortunately no one of...
23 March 2015 8,975 1 View
Hello. I'm working with rotavirus infections of cells. Usually when I infect with RRV the cells die very fast (as soon as 24 h.p.i) and then they usually detach one by one and you can observe a...
17 March 2015 6,402 2 View
For my master thesis I am conducting a phylogenetic research and for this I'm using tools like MEGA, IQTREE, FigTree, etc to make a phylogenetic tree. I wanted to know if IQTREE integrates the...
14 February 2021 1,541 2 View
I have been working on a study trying to estimate body mass in mammals using a skeletal proxy in R. My dataset has high phylogenetic signal (Pagel's Lambda = 0.9) and I am interested in removing...
26 January 2021 6,997 3 View
Hi all, Considering that one has the whole genome sequence (annotated) of a bacterium and wants to know if it has the potential to cause human diseases, what steps would you recommend...
26 January 2021 8,732 3 View
I have a regression equation in which I am curious if the amount of scatter around the regression line is driven by phylogeny. I know there is a lot of phylogenetic signal because Pascal's lambda...
22 December 2020 937 1 View
Hi all, I am interested to do a comparative genome analysis using EDGAR comparitive genomic tool. I have a novel bacteria whose genome sequence was obtained by us and now I was to do compare this...
10 November 2020 3,489 3 View
27 October 2020 240 3 View
Hello, I have a dataset derived from a multi-species experiment that I carried out. I have 30 different plant species from several families and 3 geographical groups. I applied 6 different...
26 October 2020 874 3 View
I have a set of about 1000 homologous protein sequences with high diversity across various genera and families. What I need is to perform BLAST alignment of each possible sequence pair and obtain...
25 October 2020 1,199 5 View
Deepwater rice cultivars found in various regions around the world have their own differences. Please mention how the deepwater rice cultivars of North-Eastern India varies from that of Southeast...
23 October 2020 1,333 3 View
Need a detailed tutorial on XLSTAT ( Input type format, output file, drawing conclusions etc) Unable to find online.
07 October 2020 6,764 4 View