Hi colleagues! I have worked on some samples using Array CGH, used "ISCA CGH 60K v2". I planned my work based on a previous kit. I placed my references in one of the tiles and my samples in other tiles. Now while trying to analyze my data, I can't choose my references as the software wants me to choose one of the samples in every tile as reference. Can anyone help me to solve this. I can't repeat the experiment and do it again.
I really appreciate any help with this.
Best regards