Any one using CLC genomic work bench Quigen for Illumina solexa sequence analysis?

29 May 2017 1 8K Report

Hello,

I have some .FASTQ files from Illumina solexa sequencing. Now I want to analyse the OTUs, generate heat map and other relevant information about the microbial biodiversity. I am trying it in CLC genomic workbench from Quigen. However, I am facing problems in trimming and finding the reference sequence. I am following the tutorial available on the quigen website. I am completely new to this kind of analysis. It would be really nice if someone can please help me with this?

1. Is there any other competent and user-friendly platform for the analysis?

2. If I am using the CLC genomic workbench do I need to care about something intricately?

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Science method

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