I am working with PAML/dSTORM to visualize human mitochondrial DNA nucleoids. I try to visualize sequences of mtDNA by FISH, mostly with Alexa 647 and Cy3b. Now I have to find match for theese dyes from Abberior to be able use it for STED microscopy (to compare).

Also, I am curious about theese two types: NHS activated and maleimid activated. Which one could be better for me? 

Thank you so much for help! 

http://www.sigmaaldrich.com/life-science/cell-biology/detection/abberior-dyes.html

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