Muhd Hanis Md Idris

10 Questions 8 Answers 0 Followers

Questions related from Muhd Hanis Md Idris

How to choose suitable solvent model for molecular dynamics?

I had ran molecular dynamic simulation on apo protein using TIP3P, TIP4P, TIP4PEW and SPC for 25 ns to establish the most suitable solvent model for specific protein. However, none of them gave...

05 May 2018 7,823 3 View

What is the number of cells and which culture plate that need to used for growth curve assay?

How much the cells that I need to use for developing growth curve of the cells? What is the size of cell culture plate that I need to use? Is there any standard guideline to follow? At the moment,...

07 July 2016 4,416 4 View

What the software can be use to predict the side effect of the compound?

I'm looking the free software as well as commercial software that can use to predict the side effects of the lead compound like liver toxicity and so on. Thanks.

04 April 2016 1,589 4 View

What is the different between conformation generated using LigPrep and ConfGen?

In library preparation, LigPrep will be used followed by ConfGen. Both of software will generate conformation. So, is it necessary to do ConfGen after LigPrep because both will generate the...

09 September 2015 1,850 0 View

Do I need to do ligand preparation and generate conformation before converting into ldb format?

I want to screen the compounds in Ligand Scout. So I need to convert the compound to lbd format as Ligand Scout only accept that format. Is it I need to do ligand preparation and generate...

08 August 2015 6,052 3 View

How can to know the compound that is synthesis is active for biological testing?

I already have synthesis compound. Is it I can directly use is for the study or I need to know the compound is active or not? So, how know whether the compound is active or not?

06 June 2015 7,925 2 View

What method can be used for developing multi-target inhibitor using in silico technique?

Reliable method that can be used.

03 March 2015 4,271 2 View

Is it necessary to measure the cytokines level as well as their protein expression at the same time?

May I know the different if we measure the cytokine level using ELISA and protein expression (Western blot and RT-PCR)? Some of the journal measure both.

02 February 2015 4,020 3 View

How to download database from .sh type files?

I have download the chemical database in .sh type files. How can extract it to .sdf files? I'm using Windows.

12 December 2014 9,915 2 View

What is the best animal model for rheumatoid arthritis?

What the different between all the model? Preferably rat/mouse.

10 October 2014 3,351 9 View