David Otaegui

6 Questions 12 Answers 0 Followers

Questions related from David Otaegui

Which is the best tool for analyze DNA-seq data From ITS region (Where Can We found a good library fro the aligment)?

I am trying to find a bioinformatic tool to analyze FASTAq coming from ITS region

01 January 2019 1,337 6 View

Have anyone experience about the effect of time in the expression of CircRNA?

We have some experience in different splicing in some RNA depending of the time that the blood is in the bench waiting for the RNA extraction. We are wondering if that can occurs also with circRNA.

05 May 2018 5,219 3 View

Which is the correct percentage of Ethanol in the TRIZOL-RNA extraction to recover the small RNA?

Technical question about the RNA extraction with TRIZOL

02 February 2018 9,204 4 View

Does anyone has an idea about the coverage needed to study CircRNA in RNA( enriched in circRNA by rRNA depletion and RNASe R enrichement) from PBMC?

How coverage will I need in a NGS study to cover all circRNA? The sample will be RNA from PBMC, previously treated with rRNA depletion and RNAse R (to enrich the sample in circ)

04 April 2016 2,074 2 View

Anyone know how to correct batch effect in microarray expression data using BRB Array tools?

Batch effect in two datasets of HUgene Affymetrix arrays.

04 April 2013 3,731 1 View

We have some troubles with the identification of C9orf72 expansion by PCR. Has anyone a better way to detect it?

C9orf72 is an expansion related to some neurological diseases such as ALS or dementia.

01 January 2013 1,909 3 View