Which bioinformatics tool is preferable to locate specific gene sequence in human genome?

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Howard Junca

First try: Blast http://blast.ncbi.nlm.nih.gov/Blast.cgi https://en.wikipedia.org/wiki/BLAST

Rashadul Islam

Thanks a lot for your kind attention but blast can't even evaluate data up to 1MB in size.

actually I want to align bacterial genome in human genome sequence. I mainly usad FASTA format.