I am working on developing some high-dimensional survival analysis methods with R, but I do not know where to find such high-dimensional survival datasets.
Could anyone tell me where to find such datasets, for examples the data used in
"Predicting survival from microarray data—a comparative study"(http://bioinformatics.oxfordjournals.org/content/23/16/2080.full.pdf)
Dutch breast cancer data van Houwelingen et al. (2006), 295*24885
DLBCL data Rosenwald et al. (2002), 240*7399
Or any other massive high dimensional survival datasets?
Thanks a lot for your help in advance.
For the datasets included in the cancer genome atlas, you will find some clinical data sets here:
https://tcga-data.nci.nih.gov/tcga/tcgaDownload.jsp
There is survival information in the TCGA dataset. In this paper we used it. You may find the R package useful in your analysis and it may help you with the data as well.
http://link.springer.com/article/10.1186/s13073-014-0064-8
Fang, H. and Gough, J. (2014) The 'dnet' approach promotes emerging research on cancer patient survival. Genome Medicine 6(8), 64
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