What is the significance in metagenomic analysis?

More Oksana Kisil's questions See All

Do you think can be any Uranium bearing rocks in Eastern part of Iran and western part of Afghanistan?

I want to know more about Uranium ore deposits in world.

11 August 2024 6,720 0 View

Do you think can be any diamond bearing rocks in Eastern part of Iran and western part of Afghanistan?

I want to know more about diamond ore deposits in world.

11 August 2024 2,167 1 View

What is the difference between mathematical R^4 space and physical 4D unit space?

We assume that the difference is huge and that it is not possible to compare the two spaces. The R^4 mathematical space considers time as an external controller and the space itself is immobile in...

10 August 2024 6,678 14 View

If Banks do not provide credit facility, what are the options available for FPOs and impact on producer’s income?

10 August 2024 8,198 5 View

Controlling for pupil light reflex when analyzing pupil size time course?

I used eye tracking to examine how participants from two different populations (A and B) react to an image. Participants in population A exhibit larger pupil sizes over time, but they also have...

10 August 2024 3,229 0 View

What are a “Farmers Producer Organization” (FPO) and its essential features?

10 August 2024 477 5 View

Strugglling with m6A dot blot any suugesstion ?

I have been doing the m6A dot blot for a while with no improvement, I am extracting the RNA, and I can see the dots although the three biological replicas give a different reading on the memberan...

10 August 2024 8,539 5 View

Do interactions between biosphere, carbon cycle, & water cycle impact global warming & interaction between atmosphere & hydrosphere?

How do interactions between the biosphere, the carbon cycle, and the water cycle impact global warming and interaction between the atmosphere and the hydrosphere?

09 August 2024 3,291 2 View

How to get moment output in Abaqus Standart?

I have input a moment load in module load Abaqus, i put my moment load on the node surface (using reference point). I have define moment in history output and make a set for moment too. But the...

08 August 2024 4,831 4 View

How is energy cycled through the Earth's climate system and how do matter cycle and energy flow through the rock cycle?

08 August 2024 8,162 0 View

How can I find Qiime2 bibliographic sources of updated commands?

I'm making my research on metagenomics and I want to find the source of the command 'vsearch merge-pairs' that used to be 'vsearch join-pairs'' How can I cite that?

28 June 2024 3,960 1 View

How to upload 16S and metagenomic data from fecal samples to NCBI SRA database?

Hi there, I have some 16S and metagenomic sequencing data from mice fecals and I want to upload them to NCBI Sequence Read Archive (SRA). I don't know what NCBI package is suitable for my animal...

03 June 2024 9,451 3 View

Good day all. Please who knows of anywhere l can send a liquid food sample for a shotgun metagenomic sequencing?

I am a Nigerian researcher working on microbial diversity of an African fermented food product. I will appreciate it if l can get a location and price for shotgun metagenomic sequencing.

20 April 2024 2,536 2 View

Sequencing depth and paired end reads length of 16s RNA metagenomics on water samples looking for low abundance organisms?

Does anyone have any advice regarding 16s metagenomics and an appropriate sequencing depth and paired end reads. Expecting around 10-15 organisms within the samples. Thank you :)

18 March 2024 636 2 View

How to download the protein sequences included in the CAZy databases?

In the latest CAZy sequence list (http://www.cazy.org/), over 3,600,000 sequecnes have NCBI accession and they can be easily accessed. However, the remaining 550,000 sequences only have a jgi...

13 March 2024 2,439 1 View

Working on presentation about metagenomics and alternative approaches, what's approaches stands for here ?

full title: metagenomics and alternative approaches for the fundamental study and exploitation of telluric microflora "alternative approaches" here means metaproteomic and metatranscriptomics ?

03 March 2024 1,778 3 View

Which method is preferable for sequencing a bacterial 16S metagenome: the IlIumina platform or the Nanopore ?

Hi all.. I am seeking advice on the preferred method for sequencing a bacterial 16S metagenome: Illumina platform or Nanopore method? Any insights or experiences would be appreciated. #sequencing...

24 January 2024 7,679 2 View

Why am I getting shorter(200bp to 300bp) fragments and larger fragments (> 600bp) in a V3V4 metagenomic library profile even after size selection?

In a metagenomic library profile desired size is 450-550bp,getting unwanted fragments which is causing failure of the library or it is difficult to get the desired data after sequencing.

25 December 2023 8,798 2 View

Is it possible to perform RNA extraction and metagenomic sequencing from mite samples stored in ethanol?

I have red poultry mite samples which have been stored in ethanol. Now I need to perform RNA and DNA extraction followed by shotgun metagenomic sequencing. I would like to know if there is a way...

11 December 2023 6,163 3 View

How to analyse Metagenomic NextGen data stemming from with multiple primer pairs?

What is the best way of metagenomic analysis using multiple rDNA amplicons (e.g. multiple 18S and ITS for each sample)? What methodology would you use to reliably normalize and integrate the data...

21 November 2023 8,887 3 View

Abhijeet Singh

Fundamentally a wrong question
What is a metagenomic analysis?
Significance of what? In which analysis?
There is no generalization, and things are study specific in most of the case related to data.

Alex Ignatov

Oksana Kisil You should look at dinamic changes of different taxons through the season (OK, permafrost is not a case) and on taxons differentiating locations or soil levels. Even low frequency taxons (0.1-0.2%) can be important for certain biological processes.