We have collected many wild types of plants from the local environment in attempt to adapt them. There is a need to characterize some of these types, so which molecular technique is the best for such goal?
Thanks for the interesting statement. As you stated, SSR may be helpful in evaluating genetic diversity, but we still need for a strongest tool to classify such wild types.
In my opinion, a combination of micro and macro-morphological study, molecular markers (such as ISSR and AFLP) and cytogenetic should be used to classify and identify wild species.