I will like to detect and quantify acetylation in Histones and RNA. Which one is preferred?
Hello, ESI means electrospray ionisation so ESI is ionisation source so ESI-MS/MS means LC/MS/MS with ESI electrospray ionization source.
LS-MS/MS means liquid cromatograph with triple quad masspectrometer. So if you se LC/MS/MS it system without mention of ionization source.
LC/MS/MS ionisation source can be.
1. EI electron ionization
2. APCI atmospheric preasure chemical ionization
3. ESI electrospray ionization
Hope this info will help you.
Review articles on mass spec techniques for this purpose:
Article Mass spectrometry-based strategies for characterization of h...
Article Britton LM, Gonzales-Cope M, Zee BM, Garcia BA. Breaking the...
Thank you for this information Dr. Darbinyan. This will help in narrowing my search for better method of my study.
Thank you Dr. Shapiro for these wonderful articles, I am grateful. They indeed contain the basic understanding of LC-MS and its role in protein modification.
Your welcome!
follow...
I try using UCSC Genome browser but it doesn't have genome for Glossina spp registered in its database.
07 August 2018 1,879 2 View
Hello, I am currently having problems with RNA extraction. I am using mouse liver (C57BL6J), and I have extracted RNA from mouse liver before. Before this experiment, my final RNA pellets were...
11 August 2024 7,082 3 View
I have been doing the m6A dot blot for a while with no improvement, I am extracting the RNA, and I can see the dots although the three biological replicas give a different reading on the memberan...
10 August 2024 8,539 5 View
I've been performing RNA extraction on cotton petiole tissue for a few months now using the method described in the following paper, a derivative of the typical hot borate method...
08 August 2024 9,882 2 View
I am currently working on LncRNA; to know the lncRNA-protein interactions I want to do RNA pull down assay, so I need to design primers with T7 promoter. I need assistance in this regard.
07 August 2024 6,622 1 View
I am staining some brain sections stored in cryoprotectant that express a Histone H2B- GFP fusion protein that were generated ~10 years ago. I know I need to enhance signal with an anti-GFP...
07 August 2024 5,338 2 View
Recently, we observed that 99% of the sequences in our RNA-seq data corresponded to the E. coli genome. Despite multiple DNAse treatments after RNA extraction and ribosomal depletion, we were...
06 August 2024 807 3 View
I am planning to collect human fecal samples for metatranscriptomic analysis using MGI. These samples are from indigenous people living in a region with high temperatures. I will have access to a...
06 August 2024 1,367 3 View
I am analyzing cherts from different sources found within one specific geologic formation using ICP-MS/ES. My committee was asking this question about my analysis. I was not sure how to answer this
05 August 2024 7,902 3 View
Have you ever seen a LC-MS/MS method uses both internal standards and external standards (in matrix matching purpose) but the concentrations of internal standards are outside the calibration curve...
05 August 2024 3,084 6 View
I will be with my students collecting seaweed samples in a marine farm and later we will process this tissue for RNA isolation and further sequencing. Does anyone have tips on how to collect the...
04 August 2024 501 2 View