Can anyone please email me the link to tools, which can visualize trajectories from yeast gene expression time series plots and rank them according to similarities?
As partially answered by Sudipta, I'd suggest:
seaborn (https://seaborn.pydata.org/)
Bokeh (https://bokeh.pydata.org/en/latest/)
Moreover, I'd calculate similarity with any available Dynamic Time Warping algorithm, like:
The problem that you said can be easily scripted using NumPy. If I had time, I could do it for you.
What is the best way to explain human decisions and behaviors? Are human decisions, behaviors, responses and actions always the consequences of people making free choices? Why or why not?
09 October 2019 2,909 1 View
Hi As a blind bioinformatician to get a job I must be proficient in analyzing cancer datasets. Could you therefore, please share with me links to cancer datasets and to R or Python packages to...
06 July 2018 6,933 0 View
What is the compensatory power of remotely training visually impaired by providing them with sufficiently many - each other reinforcing - visual experiences to extend their limited visual field by...
04 May 2018 4,863 3 View
Abstract: What if we could without any additional cost 1. Attend lectures from home? 2. Follow them directly on our screen? 3. Make them accessible from anywhere with assistive technologies 4....
03 April 2018 2,010 6 View
In America, any supplements must be accompanied by the disclaimer that they are not intended to diagnose or treat any diseases. But why? Let's face it! In reality we are trying to accomplish what...
03 April 2018 8,302 9 View
Can I request that my immigration status gets adjusted so that it will no longer keep less-competitive jobs away from me as it has done for the past 25 years? The main barrier, which has prevented...
03 April 2018 6,676 0 View
What are the great still undiscovered benefits of standardizing the functional layout and display the same functions at all websites? What must happen so that people like me can work more...
03 April 2018 2,723 0 View
For me cancer is an exciting fascinating, but simultaneously fear-inducing phenomenon, similar to playing with fire, because it is nature’s proof that immortality is not only possible, but...
03 April 2018 4,283 11 View
Please look at attached file for figures I cannot include in this text editor. My concept based on which I intend to predict the function of genes, which are not yet known seems to work most...
03 April 2018 6,729 2 View
Title: ##### How can supervised machine learning (ML) algorithms be enhanced in their effectiveness to improve their predictive power by requiring proper feature selection; thus, advancing our...
03 April 2018 6,459 0 View
I'm currently exploring the application of Python in textile engineering, specifically in areas like data analysis, process automation, and the development of smart textiles. I'm interested in...
10 August 2024 7,429 2 View
Request Python code from this article : Gender equity of authorship in pulmonary medicine over the past decade. THANKS!
08 August 2024 6,242 2 View
Visual Studio Code (VS Code) has become a popular choice among developers for several reasons: 1. **Free and Open Source**: VS Code is free to use and open source, making it accessible to...
07 August 2024 7,013 4 View
There are a huge number of methods for studying objects in space, according to the senses (and not only). Mechanical, thermal, optical, acoustic, electrical, magnetic, based on particle beams,...
06 August 2024 7,102 0 View
I have prepared a liquid broth containing Yeast (S. Cerevisiae) that i need to add from it to fermentation media of lignocellulosic hydrolysate. I need to know based on what parameters do we add...
06 August 2024 662 1 View
As described in the Multifractal detrended fluctuation analysis (MFDFA) algorithm, it at first calculates the profile of the time series, and then other steps are operated on the profile....
05 August 2024 9,366 2 View
I aim to be as skeptical as possible regarding whether a pair of orthologous genes results in the same phenotype in their different but related bacterial organisms under similar environmental...
05 August 2024 6,787 4 View
I am performing ligation of the plasmid and a target gene. The steps I have taken are: 1. Double digestion of the plasmid and target gene 2. Ligation of the plasmid with the target gene 3....
05 August 2024 2,570 3 View
I need the python code to forecast what crop production will be in the next decade considering climate and crop production variables as seen in the attached.csv file.
05 August 2024 2,977 3 View
I want to know how do you make real time pcr solation ? is there any machine to make it? thanks for answering
05 August 2024 1,660 0 View