I am tring for homologous recombination of long fragment in bifidobacteria  , i want to replace apart of the pyrimidine production genes  with another one to increase production of another substance .For this purpose i am using temperature sensitive plasmid and incubate at 42 degree . and let for homologous recombination . how ever after all that there is no homologous recombination after PCR check .

please help me with the best way for such like purpose .

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