Hi! Working on microbiological methods for an undergraduate thesis project. Wondering how detailed we have to be identifying the bacterial isolates we have in order to have respectable and meaningful data.
We aim to identify potentially pathogenic bacteria from holy water fonts in churches. We'll do so by collecting holy water samples from the fonts, then inoculate them into selective media.
We're focusing on Streptococcus and Staphylococcus-- so we're inoculating the diluted samples into Mannitol Salt Agar (selects for Staph) and (selects for Strep). So with these media we narrow down the bacteria to the genus level. For a meaningful study, do we have to identify all colonies up to the species level?
Initially we planned to do this via DNA sequencing of colonies, but it proved too costly. What biochemical tests should we focus on to differentiate the Strep species and the Staph species, while reducing costs/redundancies?
We're thinking of Catalase Test, CAMP test, Taxos A and P tests for Strep; and Blood Agar plating, Coagulase Test, and Catalase Test for Staph. Would these be enough to identify the species under Streptococcus and Staphylococcus? Other suggestions of other tests that would simplify the identification would be much appreciated.
Thank you very much!