I need to adjust my window detection settings in order to find the optimal binning size, but I don't know what the units are in PeakScanner and/or GeneMapper. You can adjust these in the settings, but I have no idea how their unit of 'data points' converts to base pairs. They both start at a value of 15 data points and I'm interested in analyzing my data with a window value that varies between 0.5 and 5 base pairs and then running the Automatic Binner script by Ramett to determine the best combination of window size and shift value. I'm not even sure you can adjust shift values in PeakScanner.... I'm conducting ARISA on bacteria/fungi with universal primers.