Hello everyone,

My experiment is to assess the expression levels in cultured cells after the clock has been reset, or in mouse liver by qPCR. I have multiple timepoints and have performed multiple replications for each qPCR and aim to plot them. I came across CircWave and JTK-Cycle, but I cannot seem to figure out how they work. Especially for JTK_cycle, it seems to be more suited for HT datasets.

Do you have any recommendations on how to use them or another software to plot data that have rhythmic patterns?

Thank you all,

Rafailia