I have been attempting to extract a protein expressed using IPTG induction from my BL21 culture through sonication for an extended period, but this method has repeatedly failed. Subsequently, I tried periplasmic extraction by inducing osmotic shock using sucrose, which also did not result in the release of the protein. Despite troubleshooting the extraction with various protocols, the problem persists. I would greatly appreciate any advice on the procedure or alternative approaches to address this issue. Below are the details of sonication i used for my protocol :
I've attached images showing the sonication results (pellet and supernatant with minimal protein) and the periplasmic extraction.