So I just performed my first Treg suppression assay from cells isolated from C57Bl6 mice, and the T cells didn't proliferate...
My method: I used the MACs kit to isolate all my cell types, irradiated the CD4- APCs and stained the Teff with CFSE. I cultured using 50,000 Teff and 50,000 APC in an anti-CD3 coated plated (1ug/mL) and serially diluted the Tregs to get 1:1, 1:2, 1:4 Treg:Teff ratios, etc. Cultured for 4 days. Stained with CD4-APC and DAPI, then took it to flow cytometry. The cells looked healthy and I had good CFSE and CD4 staining, but there was no proliferation of the T cells, even in my control with no Tregs (only APCs and CD3 coating). Any suggestions as to why I didn't get any proliferation?
Also, I've noticed in the protocols that no one ever mentions a need to refresh the media. Do the cells really last 4 days in culture in a 96 well plate without refreshing the media? I personally refreshed the media every day because the color would get pretty pale (I would centrifuge, take out 100uL, then put in 100uL fresh media; kept them in 200uL total media).
Thanks for any help or advice!