How can you identify a specific variant (specific SNPs) after we have received the sequences after sanger sequence ? that is mean how we can reveal a specific variants in the sequence ?
firstly you can copy the reference of your sequenced gene from NCBI. Then using mafft or other multiple sequence alignment tool you have to align all the sequences. And finally open the aligned fasta file using JalView you can find the mismatches. This "JalView" software provides an interactive platform.