Dear all,
I have performed Lowdin population analysis using QE. I would like to assign partial charges to each of the atoms in my system. My system is really small like a CH3F/CH3Br molecules. I assign the partial charges by subtracting the total charge from the Lowdin charge analsysis and I expect the summation of the partial charges to be zero. However, in all my cases I am getting the summation of partial charges to be a positive number. I did not assign any charge to the molecules and they are all neutral molecules.
I would really appreciate your help, in case you can point out where the problem might be.
Best,
G