Problem with Bluefuse software for SNP array analysis

More Najmeh Ahangari's questions See All

Failed DNA sequencing reaction

I sent my PCR products for sequencing. Unfortunately all of them have noise. After post PCR gel electrophoresis I had very sharp bands without any unspecific bands or dimer primer. What could be...

06 July 2014 4,917 40 View

Why am I getting undissolved DNA using the salting out method?

I'm using the salting out method for the first time. I could gain DNA, but in the final step when I added TE, the DNA was not dissolved completely! What could be the cause?

03 April 2014 4,101 8 View

Could anyone suggest an agent to obtain more free fetal DNA from maternal plasma?

To study some mutations in Cell free fetal DNA from maternal plasma, more free fetal DNA, could help to get more accurate results. I found In one article this was obtained using formaldehyde add...

09 October 2013 9,704 2 View

Which genetic tests could be helpful for a couple (first cousin) without any history of congenital and genetic disorders?

I met a couple (first cousin) that was worried about their marriage and its consequences. They don't have any history of genetic disorders. How can I help them?

06 July 2013 1,011 7 View

Does anyone have an e-book about bioinformatics ? How can i find it ?

I need to know about bioinformatics . because I sholud find some information through BLAST ( NCBI) . I don't know how can I do it !

04 May 2013 6,082 20 View

How to learn more about SPSS and its Application?

I would like to learn more about SPSS and Its application especially in regards to data analysis. Please suggest me how I can learn more about it. Thank you so much.

11 August 2024 9,101 4 View

Can I base on reverse DNA sequences to perform alignment, convert to amino acids and GenBank submission?

I have reverse sequences (AB1 format), can I base on reverse DNA sequences to perform nucleotide alignment, convert nucleotides to amino acids and deposit the sequence in GenBank database?

11 August 2024 5,138 1 View

Baseline drift in HPLC? What causes this?

Hello, Why do i see this baseline drift when i compare my blank (black) to the sample (blue)? Any suggestions as to why this happened? Thank you!

11 August 2024 3,770 4 View

Text-Communication from the M1 Hand Area using BCI—and then there is Elon Musk?

Willett, Shenoy et al. (2021) have developed a brain computer interface (BCI) that used neural signal collected from the hand area of the motor cortex (area M1) of a paralyzed patient. The...

10 August 2024 7,180 0 View

Has anyone applied Python in the field of textile engineering for data analysis, automation, or smart textiles?

I'm currently exploring the application of Python in textile engineering, specifically in areas like data analysis, process automation, and the development of smart textiles. I'm interested in...

10 August 2024 7,429 2 View

How can I use the cif data obtained from rietveld refinement extracted via gsas2, for microstructural analysis using ETEX software?

09 August 2024 7,718 0 View

How are iso-frequency contours plotted?

Let's say we have a standard, regular hexagonal honeycomb with a 3-arm primitive unit cell (something like the figure attached; the figure is only representative and not drawn to scale). The...

07 August 2024 1,937 1 View

How to prepare the nanoparticle treated fungal sample for Environmental SEM analysis?

A fungal strain was treated with nanoparticles. We want to do an environmental SEM analysis. So could anyone share your views on preparing the sample? Thank you.

07 August 2024 5,307 1 View

How to normalize and take the significance of the MTT OD values with 3 replicates for the same cell-line?

Hi, I have a question about normalizing the MTT OD values for doing the statistical analysis. So, if we have 3 different plates and we call them 3 different replicates, so, first we would...

07 August 2024 8,106 4 View

Why does my protein refolded to beta sheet during thermal denaturation analysis?

Hi! So i attempted to understand a novel protein behavior towards heat application by analyzing its secondary structure change. I subjected the protein to a thermal denaturation analysis using...

06 August 2024 1,989 3 View

Mohsin Amir Faiz Khan

Wouldn't it be better for you to perform SNP array analysis in R? Details of relevant classes available to use are in the following paper:

https://academic.oup.com/bioinformatics/article/23/5/627/238203/SNPchip-R-classes-and-methods-for-SNP-array-data

Good luck!

Mohsin

Najmeh Ahangari

Thanks for your suggestion.

Regards