I am using a GCMS system to analyze ambient air samples looking for different VOCs. For calibration, we used a standard cylinder with the target gases. We found that with the method we were using at the time there was a small quantity of water going to the detector when sampling and analyzing at the same time. This was causing ion source degradation quite fast even in two weeks the signal will decrease by half or more.

My question is if there is a way to correct those calibrations by normalizing the signal somehow? or I just have to include a huge factor of uncertainty regarding the calibration SD?

Attached is a plot showing the changes in the calibration response during the sampling period. It goes higher when we change the ion source.

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