After doing TBSS analysis, is there a method of extracting out the tracts, their coordinates, tscores and no of voxels ?
Hi, here are some useful answers:
https://www.researchgate.net/post/How_can_I_extract_significant_clusters_their_sizes_MNI_coordinates_and_corresponding_FA_values_after_randomise_in_TBSS_analysis2
fslmeants, atlasquery and cluster help to extract the coordinates.
fslmeants:
https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Fslutils
cluster:
https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Cluster
atlasquery:
https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/Atlasquery
and probably fsl's mailing list:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?A2=ind0712&L=FSL&D=0&P=245768
Thank you! These links were useful.
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