Metagenomic Downstream Analysis ?

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Is there any published or unpublished statistics on dropout rate (Dose1 to Dose-2) for Covid-19 vaccination in India, US, UK or any other country?

Are there any published or unpublished statistics or papers on the dropout rate (Dose1 to Dose-2) for Covid-19 vaccination in India, USA, UK, or any other country where vaccination has started at...

28 February 2021 4,237 1 View

CUDA Out Of Memory (OOM) error while using GPU?

I'm training a neural network (E3D-LSTM) for spatio temporal video prediction. It's quite a big network that has millions of parameters. The model is training perfectly when using my 12 CPU cores,...

25 December 2020 1,229 3 View

Which area i should focused in FSW of Al-Steel with interlayer?

Can anyone give me suggestion about topic to carry my research? As i see there is number of publication in this area.so i am not getting that which objective i should keep for my research.

04 September 2020 2,286 2 View

Comsol electromagnetic simulation. How to give a mesh for certain micrometer when my tool is in millimeter. The current density is so small. Pls help?

Hi, I am trying to perform mesh convergence and I found out there is no stable temperature value I obtained. So, I calculated the skin depth and it was around 0.00011mm. It is so small in...

24 August 2020 9,060 2 View

Which option (SFA-Cross Or DEA-DMU) is best to measure the individual efficiency (for a sample size of 450 farmers)?

I am working on a set of data, collected from a field survey. I am looking forward to measure the the level of technical efficiency of type of irrigation channels (Solar pump set/ Diesel pump set...

06 August 2020 2,510 3 View

How to increase accuracy in Speech emotions recognition ?

In speech based emotion recognition, for individual artists almost get 90 percentage of accuracy using neural network, but accuracy is decreased up to 70 percentage for entire speech corpus. How...

19 July 2020 4,900 1 View

What are the different methods of estimating snow melt contribution in runoff?

I want to estimate the runoff due to rainfall but the data I have, contains final runoff (i.e. runoff + snowmelt) so is there any method to calculate the contribution of snowmelt in the final...

16 July 2020 6,415 3 View

What happens when metallic mercury engulfs silver and how it reacts with sulfur?

I have done an experiment in which mercury engulfs silver and when we added sulfur it turns to black and after the incineration process at 650-degree celsius for 3 hours, we obtained a black color...

03 May 2020 4,656 11 View

How to model in COMSOL (Induction heating) . A current applied for 600A for 10 min and continue then 100A for next 5 min. Can someone help me please?

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10 April 2020 5,565 12 View

I'm having a hard time to get the UV-vis spectra of acetone. What may be the reason?

I'm getting a weird UV spectra for pure acetone. The analysis were performed on Shimadzu UV-vis spectrophotometer however the graphs weren't good with noise patterns as seen on the image. Any help...

11 November 2019 9,477 5 View

Can we classify HV and LV lines based on line length?

I have dataset which shows the length of power lines. I need to classify the lines based on the line length. Is there a rule to classify the High voltage (HV) and low voltage (LV) lines based on...

03 March 2021 4,116 4 View

What analysis to choose with a large neste dataset and clearly skewed or kurtotic distributions?

Hello! I have a dataset of n=3000 nested within 8 countries with approximately 200 or 400 responses in each country. I originally planned to perform multilevel modelling with 4 dependent variables...

02 March 2021 6,865 1 View

Do you know any MR image dataset?

I would like to research on MR images (0.5T and 3T). Can you please suggest some websites that I can download dataset including both 0.5T and 3T MR images? Thank you.

02 March 2021 7,735 3 View

Can NFL theorem be valid in infinite search space in ML?

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01 March 2021 1,189 3 View

Would fecal samples stored at -20C for over a year impact metagenomic analysis?

Dear All, I have access to some rodent fecal samples that have been stored at -20C instead of -80C. Anyone have experience with the impact of stowage condition on comparative metagenomic analysis...

01 March 2021 2,512 1 View

Does anyone know HRM channel in a 2 plex QIAGEN Rotor- Gene Q qPCR can be used as a separate channel?

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01 March 2021 8,544 1 View

Does anyone have kinetic and kinematic dataset for gait classification?

I want to differentiate between normal and abnormal movement. For this reason, I am looking forward to this type of dataset.

01 March 2021 9,485 1 View

Where can I find public datasets with Covid-19 patient information?

Hi, I'm looking for public datasets that have CT, X-ray information, or medical records for patients with Covid-19. Does anyone have suggestions?

28 February 2021 4,760 3 View

I need dataset for recommandation system?

Hi every body I need to collect datasets from different source to work on recommendation system algorithms, could you advise me how collect data?

27 February 2021 7,063 7 View

How to evaluate unsupervised clustering metrics when some elements do not have a cluster label in the result?

I run algorithms like HDBSCAN and MeanShift, and compare them with K-means and GaussianMixture. The first two algorithms do not return cluster labels for some elements in the dataset. My question...

27 February 2021 428 3 View

Timur Yergaliyev

Hi, you can take a look on Qiime2 and Mothur piplines. Both of them have nice tutorials.

Vineet Vishal

Thank You Dr Yergaliyev for the kind response..

I already done 16S Qiime pipeline and want to explore further options in windows especially cloud computing.

Harry Lerner

Hi,

EZbiocloud offers simple processing for 16S amplicon sequencing analysis, although, if I recall correctly, not much of control/information over the analysis pipeline.

https://www.ezbiocloud.net/

dada2 + phyloseq or Qiiime2 are surely the better options if 16S sequencing analysis is a reoccuring task for you.