can any one tell me the MD simulation analysis tutorial of protein-protein, peptide-peptide and ligand-peptide other than Bevan Lab tutorial. or if there any thesis related to it is available on the web kindly post the link.
One thing that you should be aware of is that there is no such thing as a one-size-fits-all tutorial for analysis. You should have analysis planned before you even start the simulations based on what you want to accomplish with the simulations. Some tutorials (like mine) offer general advice on how to use various tools, but nothing should supplant your own curiosity about the system at hand.
One thing that you should be aware of is that there is no such thing as a one-size-fits-all tutorial for analysis. You should have analysis planned before you even start the simulations based on what you want to accomplish with the simulations. Some tutorials (like mine) offer general advice on how to use various tools, but nothing should supplant your own curiosity about the system at hand.