We are thinking to extract and purify non-sulfated as well as sulfated glycosaminoglycans from bacteria. If anyone have experience regarding the above, please help me!
Try lysing the bacteria (such as using volatile non-aqueous solvents, followed by evaporation of the solvent) and then precipitating the glycosaminoglycans using a solution of cetylpyridinium chloride. The cetylpyridinium can be displaced from the glycosaminoglycans by resuspending the precipitate in 2 M NaCl in 75% ethanol at 4 degrees Celsius, followed by washing the remaining NaCl-glycosaminoglycan precipitate with cold 75% ethanol repeatedly to remove the NaCl. A procedure for the cetylpyridinium chloride precipitation and isolation of the precipitated glycosaminoglycans can be found in the article Andrew et al. Journal of Clinical Investigation 89:321-326, 1992.