Is there any functional enrichment tools to calculate P-value for multi-set gene list files?

04 April 2015 1 2K Report

I have about 260 files containing gene lists from Fly, Human and Yeast. I want to analyze each gene list based on GO structure and calculate the P-value of them. I tried to use GOTermFinder and David tools, but these tools can not identify some genes. The GeneCoDis works very good, but it can't take multi-set files as input. Is there any other tools to calculate P-value of a gene list?

http://go.princeton.edu/cgi-bin/GOTermFinder

http://david.abcc.ncifcrf.gov/summary.jsp

http://genecodis.cnb.csic.es/

Morteza Kouhsar

Thank you dear Ankit. Can you get me the link of its website please?

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