Is there a way to model Multi-mimer Homology modelling using Chimera (MODELLER)?

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Ramachandran Vijayan

Follow the steps given in the tutorial: https://static-bcrf.biochem.wisc.edu/tutorials/modeller/Chimera_II_Modeller_GUI_document.pdf

Omar A. Soliman

Hello there

Thanks a lot every one to your help,

I have stumbled across PyMod 3.0 a very insightful plugin for PyMol

https://academic.oup.com/bioinformatics/article-abstract/37/10/1471/5917627?redirectedFrom=fulltext

https://github.com/pymodproject/pymod

It allows multi-chain alignment of target sequences to a template(s), I used to model trimeric and pentameric structures with very high quality.

I highly recommend it

Thanks!