I can recommend you Mestrenova software. The website is

www.mestrelab.com

You may get 45 days trial license to try, but later you have to pay. For academic institution it was around 100 USD for single license for 1 year. I do not know exact prices for right now.

With that package you can process data from most branded magnets (Brucker, Varian, JEOL), 1D and 2D experiments as well.

Hello,

for our section (Computational Systems Medicine at Imperial College London)(http://www1.imperial.ac.uk/computationalsystemsmedicine/), we use NMR for metabolomic studies regularly. For NMR acquisition and spectral processing (phasing, reference calibration, etc), we tend to use TopSpin software from Bruker (http://www.bruker.com/products/mr/nmr/nmr-software/software/topspin/overview.html)- our nmr machines are also from Bruker.

Then, for further spectral processing (e.g. cutting out water) and statistcal data analysis & visualization, we generally use MATLAB from Mathworks (http://uk.mathworks.com/products/matlab/?s_tid=hp_fp_ml), as well as SIMCA from Umetrics (http://www.umetrics.com/products/simca).

For Topsin especially (and maybe also SIMCA) you may wish to arrange institutional/departmental/group licenses f (I don't know how much these cost, as this is arranged by other colleagues in our group). For MATLAB you can also get a group license, etc. or, if you're a student, you can get a (cheaper!) individual student licence for around £60 which is much more cost-effective.

(Note for MATLAB, you will need to learn the language, which can take a while, whilst SIMCA and is much more user-friendly- just clicking several buttons. TopSpin is a combination of writing simple commpands and clicking buttons.

Hope this helps!

http://www.bruker.com/products/mr/nmr/nmr-software/software/topspin/overview.html

http://www1.imperial.ac.uk/computationalsystemsmedicine/

http://uk.mathworks.com/products/matlab/?s_tid=hp_fp_ml

http://www.umetrics.com/products/simca

Thanks Konstantin. We are also using different processing software. Our aim is not to identify compound, we already know how to do that. That we want is compare profil, proceed data to observe real modification of the metabolomic profile.

Thanks a lot Sabrina . I'm also working with a bruker NMR. So it will help a lot.  I have got tools now I need to figure out how to us all of them to reach my goal.

Hi,

check out our review about NMR based metabolomics: https://www.researchgate.net/publication/244994377_Current_Experimental_Bioinformatic_and_Statistical_Methods_used_in_NMR_Based_Metabolomics

Article Current Experimental, Bioinformatic and Statistical Methods ...

Great paper Helena. It already helps me a lot. Thank you