Is 16s region of bacteria chromosome enough to build a phylogenetic tree of Burkholderia spp. from rice samples?

Carlos Antonio Riera-Ruiz @Carlos-Riera-Ruiz

22 February 2016 1 485 Report

I have been using 27f and 1492r primes to sequence 16s region form Burkholderia spp. from rice samples. Since the Burkholderia complex species are very closely related I have been wodering if 16s region is enough to build a phylogenetic tree.

Carlos Antonio Riera-Ruiz

Thank you Dr. Spencer. I will definitely check those resources. I did not know about RDP. Today I am aligning recA gene regions from different Burkholderia spp available on GeneBank since some authors have reported it is useful to differentiate closely related bacteria.

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