I have been performing IHC with fluorescent staining on Human brain tissue sections (FFPE). I am trying to assess 3 primary antibodies (+DPAI, therefore 4 channels) for colocalization, which does not give me many options for secondary antibodies. The problem is that with the control for non-specific binding, using only AF568 secondary Ab, the observed fluorescence has a very similar pattern as when using it with the primary antibody, and has a cytoplasmic-specific distribution and not just random/unspecific background. Any idea what could this be, or why could it be happening?
I do not have this problem with the other two antibodies (AF647 and AF488).
AF568: raised in donkey Vs Rabbit 1:500
Related Primary Ab: raised in Rabbit (Reactivity: Human, Mouse, Not Species Specific)
Blocking solution: 10% BSA
Washes after antibodies are 5x5min PBS
Thank you.