Please go to my publication page and check the following article. Full text is available and we did 2D gel brain proteome in zebrafish but can help for the method. If you want detail method pl. check cross ref. s also or send me a message.
Chronic Unpredictable Stress (CUS)-Induced Anxiety and Related Mood Disorders in a Zebrafish Model: Altered Brain Proteome Profile Implicates Mitochondrial Dysfunction