I am a researcher working on sugarcane. Are there any genic SSR primers for sugarcane? How can I find it?

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Jyoti Rastogi

which type of work you want to do with genic SSR primers...?

Malika Perera

I want to identify existing markers for sugar content, yield related traits

Sanjeev Kumar

In sugarcane, genomic SSR have been reported by Govindaraj et al. 2005, and Parida et al. 2009. Following are the references that could be useful

Genomic SSR

Parida SK et al (2009) Informative genomic microsatellite markers for efficient genotyping applications in sugarcane. Theor Appl Genet 118:327–338

Govindaraj P, et al. (2005) Development of new STMS markers for sugarcane. Sugarcane Breeding Institute, Coimbatore, Tamilnadu, India.http://www.nrcpb.org/content/development-new-stms-markers-sugarcane.

EST-SSR

Singh RK, et al (2013) Development, cross-species/genera transferability of novel

EST-SSR markers and their utility in revealing population structure and genetic diversity in sugarcane. Gene 524:309–329

Oliveira KM, et al (2009) Characterization of new polymorphic functional markers for sugarcane. Genome 52:191–209

Thank you for your reply sir