Hello, can anyone explain to me how to prepare SSR input data file for NTSYS-pc? The scoring was based on band size. I have 7 loci with 14 alleles and 20 plant samples
First of all you have to convert your allele scoring into 1/0 binary format and then prepare your input file as below;
1. In excel sheet Cell 1A write 1 (rectangular) then Cell 1B- No of Markers (in rows) (Count allele as marker) , Cell 1C- No of genotypes (in column) and cell 1D- symbol use for missing value.
2. You can also check whether your input file is correct or not in NTSys software before your process to analysis.